binding
of
rhodamine
.
One
such
series
of
compound
were
free
fatty
acids
of
the
types
found
in
acylsugars
.
Glycerols
esterified
to
fatty
acids
from
C4
to
C10,
the
range
of
chain
lengths
found
in
acylsugars
of
L
.
pennellii
were
also
used
as
test
compounds
.
The
tests
of
rhodamine
B
binding
to
free
fatty
acids
indicates
that
this
test
could
be
strongly
biased
depending
on
fatty
acid
chain
length
(Table
1)
.
The
assays
response
is
very
strong
in
fatty
acids
of
C7
and
greater,
but
weak
to
non
-
existent
in
fatty
acids
shorter
than
C7
.
The
Rhodamine
B
assay
was
similarly
affected
by
fatty
acid
chain
length
in
tests
on
diacylglycerols;
however,
diacylglycerols
with
shorter
fatty
acids
appeared
to
have
greater
affinity
for
Rhodamine
B
than
free
fatty
acids
of
the
same
length
(data
not
shown)
.
Since
the
relative
levels
of
the
different
fatty
acids
present
in
acylsugars
varies
with
genotype,
the
bias
for
fatty
acid
chain
length
could
result
in
false
negatives
or
in
errors
in
estimation
of
relative
acylsugar
levels
among
genotypes
when
the
Rhodamine
B
assay
is
used
.
Table
1
.
Average
absorbence
values
from
Rhodamine
binding
to
increasing
amounts
of
different
fatty
acids
.
Concentration
.
003M
.
045M
.
067M
.
1M
.
15M
.
224M
.
335M
.
5M
.
045M
propionic
acid
(C3)
0
.
01
0
.
01
0
.
01
0
.
01
0
.
00
0
.
01
0
.
00
0
.
01
0
.
01
isobutyric
acid
(C4)
0
.
01
0
.
01
0
.
01
0
.
02
0
.
01
0
.
03
0
.
03
0
.
05
0
.
01
2
-
methylbutyric
acid
(C4)
0
.
01
0
.
01
0
.
02
0
.
02
0
.
03
0
.
06
0
.
11
0
.
23
0
.
01
n
-
valeric
acid
(C5)
0
.
01
0
.
01
0
.
01
0
.
02
0
.
03
0
.
06
0
.
26
0
.
53
0
.
01
3
-
methyl
-
n
-
valeric
acid
(C6)
0
.
01
0
.
01
0
.
02
0
.
04
0
.
10
0
.
21
0
.
23
0
.
79
0
.
01
heptanoic
acid
(C7)
0
.
21
0
.
44
1
.
00
1
.
71
2
.
00
2
.
00
2
.
00
2
.
00
0
.
44
octanoic
acid
(C8)
>2
.
00,
>2
.
00
>2
.
00
>2
.
00
>2
.
00
>2
.
00
>2
.
00
>2
.
00
>2
.
00
8
-
methylnonanoic
acid
(C10)
>2
.
00
>2
.
00
>2
.
00
>2
.
00
>2
.
00
>2
.
00
>2
.
00
>2
.
00
>2
.
00
decanoic
acid
(C10)
>2
.
00
>2
.
00
>2
.
00
>2
.
00
>2
.
00
>2
.
00
>2
.
00
>2
.
00
>2
.
00
Since
these
results
suggested
that
chain
length
biases
were
the
basis
for
the
discrepancies
between
the
results
of
the
Nelsons
and
Rhodamine
B
-
based
tests,
gas
chromatograph
analysis
was
performed
of
the